Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907298.1_cds_XP_016457441.1_51167
CDS Infomation

[gene=LOC107781268] [db_xref=GeneID:107781268] [protein=uncharacterized protein LOC107781268 isoform X2] [protein_id=XP_016457441.1] [location=complement(join(124883..125366,125448..125512,125735..125771,127643..127806,127889..128951,129769..129857))] [gbkey=CDS]
Sequence

ATGGCAAAGAAGAAAGCAACCATGACTCTCAAAGACTTTCATGGTGGTTCTATTCCTTCA
GATCTTCCCTTACCTTCTGCTCCTGGCGTAATGGTTAGGCCATCAGATCGTGGTGGTTTT
GATCGCCAGACATCATGGGGAAACCCCATGGGAAGGCCAGAGCACCGTTTACGTCCGGGA
TCAGCTGGTGCAACCAGAAACTTTGATGAGAAGACTCCTTTCTTGAGCCATAATGCACCA
ATAGGCCGTAATTTTGATGAGGATGAAAGAAAGCCATTGGATGGAGCATCTGGACCTCGT
CGAACAGTTAGTGATGAGAGTATCCGTGCGTTGCCAAGTCGTGTGGAACCTAAGGCAGAA
TACTCTATCACTGGGATGGTAGGTAGCGGGCAAGTATCAGCTCCTCCATCTCAAAGTTTT
AGAGGTGCAGCAAGTGGTACAAATGTGGCTAGGTTTAATGAAGCGACTAGTATGGGAGTG
AGTACTAAAAGTTCTGGTAGTGGCATTGGCAGTGGCAGGAGGGCGAGTTCTCCGAATGTG
TCTGCAAATAGTGGTCAAGTGGTTACTGGGTCATATCCAAATGCGTGGGGCCTAAGAAAG
GAGGTGCCAAGTGCAAAAGAATCAGTTTCTGCTCCATGGTCTGCTCCGGATGCTGAGTCA
AAGTTGGCCCATGCCAGTGCCCTCGAGAAAGTCTCATCTGGCAGGTGGCATTCAAAGCAG
CAGATTCATTCTCAGGTTGATGTTGAGGTCATTAAACATCCAGACACAGAGAAAGAATTC
TATCATCACGGAAGTACTATGGTCTACAATAATGTCTCCAACATGCCAGATGTCGTGGGA
GGACCCGAATATAGTGATCAGGTGCTAGCGGTGCATGCCGAAAGAAGTCTTGCTCTTGCA
GATGGGGTTCATGGGTTTAGCAAGGAGTTACCAGCACGGGAGAGGGCCAGGTCCCCTTTA
TTTATGGAGGCAAATGAGAGAAGAGCTTCTCCTAATGTTACTGGATTTCAACGGCCCCAT
AATGTTATTAGCTCTGGTGGATATGAGTTGCAGGCGCCAGCATCTTCTGAACCATCCGAG
CGGCCCAAATTGAAGTTGCTACCAAGGTCCAAACCATTGGAGAGTCTGGAGCAGTCCATA
GATTATAAGCAGCCTAGTAATCCTGTTCGTATTGAAAAATCGGGCGATGCAAATCCCATC
AAAACTGGGTTTGTTGAACCTGAGAGTGGTAATCTTGCAATTGAACGCCCAAAGTTGAAT
CCGAAGCCTCGGTCGCAGCTTCTTGAACAATCAGAGGGAAGCACTGAAAATAAAAGGAAA
CCATTATTTGGTGCTGCTCGTCCACGTGAAATGGTTCTGAAGGATCGTGGGATTGATGAT
GTTACGCCTAATCATGATCTTCATCAACCTCATCCAAGGAACAAACTACATGGTGGCAAA
GCAGAGACAGTTATGCATGCAACCAGGCATAGTGAGAAAGTAGCGAGTATCCCCATTGAC
CATAGGATGGCAAAGAATGCAGATAGGCGAGATCACAGGACAGATGTCGAAAAGGGAGAT
GGACAGATGAGGAATTGGAGAAACGAGAACTGGAGGAACACCAAGGAGATTGAAAGGCAC
CACCACCATCAGCCGCAGCAACATGCACAGGAGAGGCCGCCCTCACCAGAAACCTGGCGC
AAGCCTGTTGAACCACCAAAACCTGCTTCTGTCGATGCTGCTGGTGTACGATATGGAAAA
GCAGCCTCTGCAGTCGAGCTTGCTACAGCCTTCTCAAGATCGGTCTCTGATCCAGCAACA
ACGGATCGTTTTTCTAGCCAGAAAGGCCTTCCTAATCGGGGTCAAATCCCTTTTTCTCGG
TTGACAGGCCCTCCTCAGAGGCCTCAGATTAACGGGTACTAA

Peptide Sequence

PEP ID

XP_016457441.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107781268 isoform X2 [Nicotiana tabacum]
Sequence

MAKKKATMTLKDFHGGSIPSDLPLPSAPGVMVRPSDRGGFDRQTSWGNPMGRPEHRLRPG
SAGATRNFDEKTPFLSHNAPIGRNFDEDERKPLDGASGPRRTVSDESIRALPSRVEPKAE
YSITGMVGSGQVSAPPSQSFRGAASGTNVARFNEATSMGVSTKSSGSGIGSGRRASSPNV
SANSGQVVTGSYPNAWGLRKEVPSAKESVSAPWSAPDAESKLAHASALEKVSSGRWHSKQ
QIHSQVDVEVIKHPDTEKEFYHHGSTMVYNNVSNMPDVVGGPEYSDQVLAVHAERSLALA
DGVHGFSKELPARERARSPLFMEANERRASPNVTGFQRPHNVISSGGYELQAPASSEPSE
RPKLKLLPRSKPLESLEQSIDYKQPSNPVRIEKSGDANPIKTGFVEPESGNLAIERPKLN
PKPRSQLLEQSEGSTENKRKPLFGAARPREMVLKDRGIDDVTPNHDLHQPHPRNKLHGGK
AETVMHATRHSEKVASIPIDHRMAKNADRRDHRTDVEKGDGQMRNWRNENWRNTKEIERH
HHHQPQQHAQERPPSPETWRKPVEPPKPASVDAAGVRYGKAASAVELATAFSRSVSDPAT
TDRFSSQKGLPNRGQIPFSRLTGPPQRPQINGY

Transcript Sequence

Gene sequence data has not been registered.